All modules for which code is available
- namedtuple_GPUStatus
- thesis.cli
- thesis.core.config.loaders
- thesis.core.config.manager
- thesis.core.config.validators
- thesis.core.context
- thesis.core.contracts
- thesis.core.decorators
- thesis.core.exceptions
- thesis.core.gpu
- thesis.core.io
- thesis.core.logging
- thesis.core.nipype.executor
- thesis.core.nipype.interfaces.freesurfer
- thesis.core.nipype.interfaces.fsl
- thesis.core.output.events
- thesis.core.output.modes
- thesis.core.output.progress
- thesis.core.output.renderer
- thesis.core.output.summary
- thesis.core.path_declarations
- thesis.core.registry
- thesis.core.utils.utils
- thesis.workflows.atlas._params
- thesis.workflows.atlas._statistics
- thesis.workflows.atlas.compute
- thesis.workflows.atlas.qc_metrics
- thesis.workflows.atlas.workflow
- thesis.workflows.atlas_to_patient.workflow
- thesis.workflows.full_pipeline._core
- thesis.workflows.full_pipeline.workflow
- thesis.workflows.hcp.config.params
- thesis.workflows.hcp.config.paths
- thesis.workflows.hcp.config.values
- thesis.workflows.hcp.nodes.roi
- thesis.workflows.hcp.nodes.roi_mapnode
- thesis.workflows.hcp.nodes.tractography
- thesis.workflows.hcp.operations.extraction
- thesis.workflows.hcp.operations.merging
- thesis.workflows.hcp.operations.resampling
- thesis.workflows.hcp.operations.streamline_warping
- thesis.workflows.hcp.operations.transformation
- thesis.workflows.hcp.operations.validation
- thesis.workflows.hcp.verifiers
- thesis.workflows.hcp.workflow
- thesis.workflows.learned_atlas._params
- thesis.workflows.learned_atlas.diagnostics
- thesis.workflows.learned_atlas.model
- thesis.workflows.learned_atlas.train
- thesis.workflows.learned_atlas.workflow
- thesis.workflows.minimal
- thesis.workflows.mrtrix3.config.params
- thesis.workflows.mrtrix3.config.paths
- thesis.workflows.mrtrix3.config.values
- thesis.workflows.mrtrix3.nodes.fod
- thesis.workflows.mrtrix3.nodes.preprocessing
- thesis.workflows.mrtrix3.nodes.segmentation
- thesis.workflows.mrtrix3.nodes.tractography
- thesis.workflows.mrtrix3.operations.density_map
- thesis.workflows.mrtrix3.operations.mask_prep
- thesis.workflows.mrtrix3.operations.tckgen_adapter
- thesis.workflows.mrtrix3.workflow
- thesis.workflows.preprocess.config
- thesis.workflows.preprocess.nodes.diffusion
- thesis.workflows.preprocess.nodes.distortion
- thesis.workflows.preprocess.nodes.registration
- thesis.workflows.preprocess.nodes.structural
- thesis.workflows.preprocess.nodes.utils
- thesis.workflows.preprocess.operations.file_ops
- thesis.workflows.preprocess.operations.label_ops
- thesis.workflows.preprocess.workflow
- thesis.workflows.qc.checks
- thesis.workflows.qc.operations
- thesis.workflows.qc.roi_overlay
- thesis.workflows.qc.statistics
- thesis.workflows.qc.track_density
- thesis.workflows.qc.workflow
- thesis.workflows.registration.fireants_backend
- thesis.workflows.registration.paths
- thesis.workflows.registration.viewers
- thesis.workflows.registration.workflow
- thesis.workflows.synthseg.workflow
- thesis.workflows.tract_similarity._io
- thesis.workflows.tract_similarity._metrics
- thesis.workflows.tract_similarity.hcp_loo
- thesis.workflows.tract_similarity.sweep
- thesis.workflows.tract_similarity.workflow
- thesis.workflows.tract_synthseg.validation
- thesis.workflows.tract_synthseg.workflow
- thesis.workflows.transforms.operations
- thesis.workflows.transforms.workflow